Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887187.1_cds_XP_016441515.1_36866
CDS Infomation

[gene=LOC107767107] [db_xref=GeneID:107767107] [protein=homeobox-leucine zipper protein HDG11-like isoform X2] [protein_id=XP_016441515.1] [location=join(15974..16107,16237..16354,16444..16626,16778..17245,17348..17449,17528..17740,17839..18019,18126..18394,18622..18711,18825..19220)] [gbkey=CDS]
Sequence

ATGGAGTACGGCAGCGGAGGTGGTGGTGGTGGTGGTGGCACCAGCAGCGGCGGCGGCGAT
CCCCGCGACGCCGCCGAGCGGAGGAAGAAACGTTATCATCGTCACACTGCTAATCAAATT
CAAAGGCTTGAAGCTATTTTCAAAGAATGTCCTCATCCAGACGAGAAGACACGATTGCAG
TTAAGCAGAGATTTAGGCTTAGCTCCTCGTCAGATTAAGTTTTGGTTCCAAAATAGGAGG
ACTCAAATGAAGGCTCAACATGAGAGAGCAGACAATTGTGCACTTAGAGCAGAAAATGAT
AAAATTCGATGTGAAAATATAGCAATCAGAGAAGCCCTCAAGAATGTGATTTGCCCATCA
TGTCCTCCTGTTACTGAAGATTCATATTTCGATGAGCAAAAGTTGAGAATAGAAAACATG
CAATTAAAAGAAGAGCTTGATAAAGTATCCAGTATTGCTGCTAAATATATAGGGAGGCCT
ATTTCACAACTCCCACCAGTGCAACCTATTCATCTATCTTCACTAGATTTGTCTATGTCT
AGTTTTGTTGGCCATGGCCCTAATTCCCTTGATCTTGATCTCGATCTTCTCCCTGGAAGT
TCGTTGACTATTCCCAGTTTGGCCTTCTCTTCATTGAATTTATCGGACATGGATAAGTCC
CTTATGGCTGATATTGCTGGGAATGCAATGGAGGAACTCATTAGATTGGTGCAAACCAAT
GAACCTTTGTGGATGAAGTCCGCTATCGATGGAAAAGATGTACTTAATTTCCAGAACTAT
GATCGAATTTTTCCAAGGGCTAATAGTCATTTGAAAAATCACAATGTTCGGATTGAGGCT
TCCAGGGATTCAGGTGTTGTTATTATGAATGGATTAGCATTAGTTGACATGTTTATGGAC
GCGAATAAATGGCAGGAATTCTTTCCTACAATTGTTTCAAAGGCAAGAACGCTTGAAGTA
ATATCATCTGGTGTGATGGGAAGCCGAACTAGTACATTGCAATTGATGTATGAAGAATTG
CAGGTGCTTTCACCATTGGTTCCAACGCGACAATTGTATTTCCTGAGGTTTTGCCAGCAG
ATTGAGCAAAGCTCGTGGGCAATAGTCGATGTTTCTTATGATATAACTCAAGAAAATCTT
TATTCTTCCACTTCTTGCAAGGTTCATAGGCTTCCATCAGGGTGCTTGATTCAAGATATG
CCCAATGGTTATTCTAAGGTTACTTGGGTGGAACATGTAGAAGTGGAAGAGAAAGGTATA
ATTCATAGGCTATGTAGAGATCTTATACACAGTGGATTGGCATTTGGAGCAGAGAGATGG
GTTGGCACTCTTCAAAGAGTTTGTGAAAAATATGCTTGTCTCATGGTTAATAGCAATCCT
ACTCATGACCTTGGTGGAGTAATTCCATCGCCCGAAGGGAAGAGGAGCATGATGAAACTG
GCAAAAAGAATGGTGAGCAATTTCTGTGCCAGCATAAATCCATCTAATGGACATCAATGG
AACACAATTTCTGGATTGAATGAGTTTGAAGTCAGAGCTACCCTTCAAAAGAGCACCGAC
CCTGGCCAGCCTAATGGTGTAATCATTAGTGCAGCCACCACCATTTGGCTGCCAGTTCCT
CCACAAAATGTCTTCAATTTCTTCAGGGATGAACGGAATCGACCCCAGTGGGATGTTCTT
TCCAACCAAAATCCGGTGCAAGAAGTAGCTCATATTGCGAATGGCTCTCATCCAGGGAAC
TGCATTTCTGTGCTGCGGGCCTATAACACTAGCCAGAACAACATGTTAATACTTCAAGAA
AGTTGCATAGACTCATCAGGGGCACTAGTAGTGTATAGCCCAGTGGATGTACCGGCTATC
AACATAGCGATGAGCGGTGAGGACCCCACGTATATCCCGTTGCTACCATCGGGGTTCACG
ATATCGCCAGATGGCCATCAACTAGACCAAGATGCAGCATCATGCAGCAGCAGCTCAAAT
GCAAGTACTATAGGAGGCAGGTCAGGGGGTTCACTTATAACAGTAGTGTTCCAAATTCTA
GTAAGCAGCTTGCCATCAGCTAAAATGAGCCCTGAATCAGTAAACACTGTGAATAACCTT
ATAGGCAGCACTGTTCACCAAATTAAAGCTGCCTTGAATTGCTCCACTTCTTGA

Peptide Sequence

PEP ID

XP_016441515.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein HDG11-like isoform X2 [Nicotiana tabacum]
Sequence

MEYGSGGGGGGGGTSSGGGDPRDAAERRKKRYHRHTANQIQRLEAIFKECPHPDEKTRLQ
LSRDLGLAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIAIREALKNVICPS
CPPVTEDSYFDEQKLRIENMQLKEELDKVSSIAAKYIGRPISQLPPVQPIHLSSLDLSMS
SFVGHGPNSLDLDLDLLPGSSLTIPSLAFSSLNLSDMDKSLMADIAGNAMEELIRLVQTN
EPLWMKSAIDGKDVLNFQNYDRIFPRANSHLKNHNVRIEASRDSGVVIMNGLALVDMFMD
ANKWQEFFPTIVSKARTLEVISSGVMGSRTSTLQLMYEELQVLSPLVPTRQLYFLRFCQQ
IEQSSWAIVDVSYDITQENLYSSTSCKVHRLPSGCLIQDMPNGYSKVTWVEHVEVEEKGI
IHRLCRDLIHSGLAFGAERWVGTLQRVCEKYACLMVNSNPTHDLGGVIPSPEGKRSMMKL
AKRMVSNFCASINPSNGHQWNTISGLNEFEVRATLQKSTDPGQPNGVIISAATTIWLPVP
PQNVFNFFRDERNRPQWDVLSNQNPVQEVAHIANGSHPGNCISVLRAYNTSQNNMLILQE
SCIDSSGALVVYSPVDVPAINIAMSGEDPTYIPLLPSGFTISPDGHQLDQDAASCSSSSN
ASTIGGRSGGSLITVVFQILVSSLPSAKMSPESVNTVNNLIGSTVHQIKAALNCSTS

Transcript Sequence

Gene sequence data has not been registered.